Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG38544.1 | SDG38621.1 | SAMN05421742_10197 | SAMN05421742_10199 | Uncharacterized conserved protein, contains Zn-finger domain. | Carbamoyltransferase. | 0.508 |
SDG38544.1 | polA | SAMN05421742_10197 | SAMN05421742_10198 | Uncharacterized conserved protein, contains Zn-finger domain. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.829 |
SDG38621.1 | SDG38544.1 | SAMN05421742_10199 | SAMN05421742_10197 | Carbamoyltransferase. | Uncharacterized conserved protein, contains Zn-finger domain. | 0.508 |
SDG38621.1 | SDG38977.1 | SAMN05421742_10199 | SAMN05421742_101108 | Carbamoyltransferase. | rfaE bifunctional protein, domain II; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family. | 0.440 |
SDG38621.1 | polA | SAMN05421742_10199 | SAMN05421742_10198 | Carbamoyltransferase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.529 |
SDG38977.1 | SDG38621.1 | SAMN05421742_101108 | SAMN05421742_10199 | rfaE bifunctional protein, domain II; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family. | Carbamoyltransferase. | 0.440 |
polA | SDG38544.1 | SAMN05421742_10198 | SAMN05421742_10197 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Uncharacterized conserved protein, contains Zn-finger domain. | 0.829 |
polA | SDG38621.1 | SAMN05421742_10198 | SAMN05421742_10199 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Carbamoyltransferase. | 0.529 |