STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG68774.1Glycosyltransferase involved in cell wall bisynthesis. (416 aa)    
Predicted Functional Partners:
SDG68809.1
N-acetylglucosaminyl deacetylase, LmbE family.
 
 
  0.826
SDG56347.1
Mannose-1-phosphate guanylyltransferase/mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.751
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
  0.736
SDH14220.1
Maltooligosyltrehalose trehalohydrolase.
   
  0.736
SDG76922.1
Maltose alpha-D-glucosyltransferase/ alpha-amylase.
    
 0.731
SDH35282.1
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family.
  
 
 0.723
SDH08367.1
UDPglucose 6-dehydrogenase.
 
  
 0.572
SDH13484.1
Helix-turn-helix domain-containing protein.
   
 
 0.563
SDG68852.1
Hypothetical protein.
       0.531
SDH36849.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.515
Your Current Organism:
Roseospirillum parvum
NCBI taxonomy Id: 83401
Other names: DSM 12498, R. parvum, Roseospirillum parvum Glaeser and Overmann 2001, strain 930I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.