Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDG69468.1 | SDG69504.1 | SAMN05421742_102143 | SAMN05421742_102144 | PH domain-containing protein. | Photosynthetic reaction center H subunit. | 0.982 |
| SDG69468.1 | SDG69569.1 | SAMN05421742_102143 | SAMN05421742_102146 | PH domain-containing protein. | Magnesium-protoporphyrin O-methyltransferase. | 0.973 |
| SDG69468.1 | SDG69764.1 | SAMN05421742_102143 | SAMN05421742_102151 | PH domain-containing protein. | 3-vinyl bacteriochlorophyllide hydratase. | 0.890 |
| SDG69468.1 | SDG69839.1 | SAMN05421742_102143 | SAMN05421742_102153 | PH domain-containing protein. | Chlorophyll synthase. | 0.815 |
| SDG69468.1 | SDG70717.1 | SAMN05421742_102143 | SAMN05421742_102180 | PH domain-containing protein. | Putative photosynthetic complex assembly protein. | 0.934 |
| SDG69468.1 | SDG70747.1 | SAMN05421742_102143 | SAMN05421742_102181 | PH domain-containing protein. | Putative photosynthetic complex assembly protein 2. | 0.838 |
| SDG69468.1 | SDG70775.1 | SAMN05421742_102143 | SAMN05421742_102182 | PH domain-containing protein. | Divinyl protochlorophyllide a 8-vinyl-reductase. | 0.750 |
| SDG69468.1 | SDH25636.1 | SAMN05421742_102143 | SAMN05421742_105140 | PH domain-containing protein. | Magnesium chelatase subunit D; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. | 0.798 |
| SDG69468.1 | bchB | SAMN05421742_102143 | SAMN05421742_102149 | PH domain-containing protein. | Light-independent protochlorophyllide reductase subunit B; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. | 0.915 |
| SDG69468.1 | bchN | SAMN05421742_102143 | SAMN05421742_102150 | PH domain-containing protein. | Light-independent protochlorophyllide reductase subunit N; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. | 0.920 |
| SDG69504.1 | SDG69468.1 | SAMN05421742_102144 | SAMN05421742_102143 | Photosynthetic reaction center H subunit. | PH domain-containing protein. | 0.982 |
| SDG69504.1 | SDG69569.1 | SAMN05421742_102144 | SAMN05421742_102146 | Photosynthetic reaction center H subunit. | Magnesium-protoporphyrin O-methyltransferase. | 0.975 |
| SDG69504.1 | SDG69764.1 | SAMN05421742_102144 | SAMN05421742_102151 | Photosynthetic reaction center H subunit. | 3-vinyl bacteriochlorophyllide hydratase. | 0.954 |
| SDG69504.1 | SDG69839.1 | SAMN05421742_102144 | SAMN05421742_102153 | Photosynthetic reaction center H subunit. | Chlorophyll synthase. | 0.866 |
| SDG69504.1 | SDG70717.1 | SAMN05421742_102144 | SAMN05421742_102180 | Photosynthetic reaction center H subunit. | Putative photosynthetic complex assembly protein. | 0.933 |
| SDG69504.1 | SDG70747.1 | SAMN05421742_102144 | SAMN05421742_102181 | Photosynthetic reaction center H subunit. | Putative photosynthetic complex assembly protein 2. | 0.817 |
| SDG69504.1 | SDG70775.1 | SAMN05421742_102144 | SAMN05421742_102182 | Photosynthetic reaction center H subunit. | Divinyl protochlorophyllide a 8-vinyl-reductase. | 0.749 |
| SDG69504.1 | SDH25636.1 | SAMN05421742_102144 | SAMN05421742_105140 | Photosynthetic reaction center H subunit. | Magnesium chelatase subunit D; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. | 0.822 |
| SDG69504.1 | bchB | SAMN05421742_102144 | SAMN05421742_102149 | Photosynthetic reaction center H subunit. | Light-independent protochlorophyllide reductase subunit B; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. | 0.934 |
| SDG69504.1 | bchN | SAMN05421742_102144 | SAMN05421742_102150 | Photosynthetic reaction center H subunit. | Light-independent protochlorophyllide reductase subunit N; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. | 0.939 |
page 1 of 6