STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG73551.1Cu2+-exporting ATPase. (807 aa)    
Predicted Functional Partners:
SDG73615.1
Cytochrome c oxidase accessory protein FixG.
 
  
 0.952
SDG73654.1
Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
   
 0.943
SDG44080.1
Copper chaperone.
  
 
 0.932
SDG73713.1
Cytochrome c oxidase cbb3-type subunit 2.
 
   
 0.912
SDG73582.1
Nitrogen fixation protein FixH.
 
  
 0.906
SDG73749.1
Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
   
 0.890
SDG49547.1
Hypothetical protein.
  
 
 0.840
SDH13214.1
Cytochrome oxidase maturation protein, cbb3-type.
 
  
 0.786
SDG73474.1
ATP-binding cassette, subfamily C, CydC.
       0.752
SDG73513.1
ATP-binding cassette, subfamily C, CydD.
       0.752
Your Current Organism:
Roseospirillum parvum
NCBI taxonomy Id: 83401
Other names: DSM 12498, R. parvum, Roseospirillum parvum Glaeser and Overmann 2001, strain 930I
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