STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH13450.1Chemotaxis protein CheZ. (262 aa)    
Predicted Functional Partners:
SDH46610.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.999
SDH77326.1
Two-component response regulator, FixJ family, consists of REC and HTH domains.
  
 0.995
SDH77125.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.959
SDG47315.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.943
SDH47221.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.943
SDH52008.1
Purine-binding chemotaxis protein CheW.
 
 
 0.916
SDH81208.1
Two-component system, chemotaxis family, response regulator CheY.
  
  0.899
SDG43927.1
PAS domain S-box-containing protein.
  
 0.857
SDG53772.1
PAS domain S-box-containing protein.
  
 0.857
SDG56188.1
PAS domain S-box-containing protein.
  
 0.857
Your Current Organism:
Roseospirillum parvum
NCBI taxonomy Id: 83401
Other names: DSM 12498, R. parvum, Roseospirillum parvum Glaeser and Overmann 2001, strain 930I
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.