STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH28789.1General L-amino acid transport system permease protein. (369 aa)    
Predicted Functional Partners:
SDH28770.1
General L-amino acid transport system ATP-binding protein.
 0.999
SDH28817.1
General L-amino acid transport system permease protein.
 
0.999
SDH28839.1
General L-amino acid transport system substrate-binding protein.
 
 0.997
SDG35799.1
Polar amino acid transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 0.985
SDG35845.1
Octopine/nopaline transport system ATP-binding protein/arginine/ornithine transport system ATP-binding protein.
 
     0.740
SDH12815.1
ABC-type amino acid transport substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 0.692
SDG55111.1
Glutamate synthase (NADPH/NADH) large chain.
   
  
 0.613
SDG49279.1
ABC-type amino acid transport substrate-binding protein.
  
 0.603
SDH23162.1
PAS domain S-box-containing protein.
  
 0.579
SDH64147.1
PAS domain S-box-containing protein.
  
 0.579
Your Current Organism:
Roseospirillum parvum
NCBI taxonomy Id: 83401
Other names: DSM 12498, R. parvum, Roseospirillum parvum Glaeser and Overmann 2001, strain 930I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.