Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDH29625.1 | SDH60764.1 | SAMN05421742_105284 | SAMN05421742_108110 | Chromosome partitioning protein, ParB family. | Chromosome partitioning protein. | 0.692 |
SDH29625.1 | SDH60803.1 | SAMN05421742_105284 | SAMN05421742_108111 | Chromosome partitioning protein, ParB family. | Chromosome partitioning protein, ParB family; Belongs to the ParB family. | 0.528 |
SDH29625.1 | rsmG | SAMN05421742_105284 | SAMN05421742_108109 | Chromosome partitioning protein, ParB family. | 16S rRNA (guanine527-N7)-methyltransferase; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. | 0.691 |
SDH60576.1 | SDH60615.1 | SAMN05421742_108105 | SAMN05421742_108106 | Hypothetical protein. | (2Fe-2S) ferredoxin. | 0.800 |
SDH60576.1 | SDH60764.1 | SAMN05421742_108105 | SAMN05421742_108110 | Hypothetical protein. | Chromosome partitioning protein. | 0.656 |
SDH60576.1 | SDH60803.1 | SAMN05421742_108105 | SAMN05421742_108111 | Hypothetical protein. | Chromosome partitioning protein, ParB family; Belongs to the ParB family. | 0.676 |
SDH60576.1 | mnmE | SAMN05421742_108105 | SAMN05421742_108107 | Hypothetical protein. | tRNA modification GTPase; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.800 |
SDH60576.1 | mnmG | SAMN05421742_108105 | SAMN05421742_108108 | Hypothetical protein. | tRNA uridine 5-carboxymethylaminomethyl modification enzyme; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 0.770 |
SDH60576.1 | rsmG | SAMN05421742_108105 | SAMN05421742_108109 | Hypothetical protein. | 16S rRNA (guanine527-N7)-methyltransferase; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. | 0.676 |
SDH60615.1 | SDH60576.1 | SAMN05421742_108106 | SAMN05421742_108105 | (2Fe-2S) ferredoxin. | Hypothetical protein. | 0.800 |
SDH60615.1 | SDH60764.1 | SAMN05421742_108106 | SAMN05421742_108110 | (2Fe-2S) ferredoxin. | Chromosome partitioning protein. | 0.656 |
SDH60615.1 | SDH60803.1 | SAMN05421742_108106 | SAMN05421742_108111 | (2Fe-2S) ferredoxin. | Chromosome partitioning protein, ParB family; Belongs to the ParB family. | 0.668 |
SDH60615.1 | mnmE | SAMN05421742_108106 | SAMN05421742_108107 | (2Fe-2S) ferredoxin. | tRNA modification GTPase; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.800 |
SDH60615.1 | mnmG | SAMN05421742_108106 | SAMN05421742_108108 | (2Fe-2S) ferredoxin. | tRNA uridine 5-carboxymethylaminomethyl modification enzyme; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 0.770 |
SDH60615.1 | rsmG | SAMN05421742_108106 | SAMN05421742_108109 | (2Fe-2S) ferredoxin. | 16S rRNA (guanine527-N7)-methyltransferase; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. | 0.677 |
SDH60764.1 | SDH29625.1 | SAMN05421742_108110 | SAMN05421742_105284 | Chromosome partitioning protein. | Chromosome partitioning protein, ParB family. | 0.692 |
SDH60764.1 | SDH60576.1 | SAMN05421742_108110 | SAMN05421742_108105 | Chromosome partitioning protein. | Hypothetical protein. | 0.656 |
SDH60764.1 | SDH60615.1 | SAMN05421742_108110 | SAMN05421742_108106 | Chromosome partitioning protein. | (2Fe-2S) ferredoxin. | 0.656 |
SDH60764.1 | SDH60803.1 | SAMN05421742_108110 | SAMN05421742_108111 | Chromosome partitioning protein. | Chromosome partitioning protein, ParB family; Belongs to the ParB family. | 0.998 |
SDH60764.1 | SDH69406.1 | SAMN05421742_108110 | SAMN05421742_11044 | Chromosome partitioning protein. | ParB-like nuclease domain-containing protein. | 0.589 |
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