STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH70698.1Cobalt/nickel transport protein. (55 aa)    
Predicted Functional Partners:
SDH82279.1
Cobalt/nickel transport protein.
 
     0.850
SDG57417.1
Nickel transport protein.
 
  
  0.835
SDG57381.1
Cobalt/nickel transport system permease protein.
 
  
 0.825
SDG57462.1
Cobalt/nickel transport system permease protein.
 
  
  0.825
SDH70625.1
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
 
     0.816
SDH82237.1
Hypothetical protein.
 
     0.783
SDH71984.1
Cobalt/nickel transport protein.
  
     0.775
SDG57338.1
Cobalt/nickel transport system ATP-binding protein.
 
  
 0.759
SDH70661.1
Ferrous iron transport protein A.
 
     0.615
SDH70586.1
Hypothetical protein.
       0.425
Your Current Organism:
Roseospirillum parvum
NCBI taxonomy Id: 83401
Other names: DSM 12498, R. parvum, Roseospirillum parvum Glaeser and Overmann 2001, strain 930I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.