STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH72463.1DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (310 aa)    
Predicted Functional Partners:
SDG41632.1
LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator; Belongs to the LysR transcriptional regulatory family.
  
     0.684
SDG87826.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.655
SDG77122.1
LysR family transcriptional regulator, nitrogen assimilation regulatory protein.
  
     0.627
SDG79089.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.564
SDH72420.1
Hypothetical protein.
       0.539
SDG55111.1
Glutamate synthase (NADPH/NADH) large chain.
  
  
 0.536
SDG50313.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.504
SDG87548.1
AraC family transcriptional regulator.
  
    0.469
SDH09776.1
LysR family transcriptional regulator, regulator for metE and metH; Belongs to the LysR transcriptional regulatory family.
  
     0.420
SDH77326.1
Two-component response regulator, FixJ family, consists of REC and HTH domains.
   
  
 0.400
Your Current Organism:
Roseospirillum parvum
NCBI taxonomy Id: 83401
Other names: DSM 12498, R. parvum, Roseospirillum parvum Glaeser and Overmann 2001, strain 930I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.