STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH73811.1CRP/FNR family transcriptional regulator, anaerobic regulatory protein. (232 aa)    
Predicted Functional Partners:
SDG55111.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.847
SDH07863.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
     
 0.762
accA
acetyl-CoA carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.
    
  0.749
SDG96884.1
PAS domain S-box-containing protein.
   
 0.732
SDG43927.1
PAS domain S-box-containing protein.
   
 0.716
SDG53772.1
PAS domain S-box-containing protein.
   
 0.716
SDG56188.1
PAS domain S-box-containing protein.
   
 0.716
SDH23882.1
PAS domain S-box-containing protein.
   
 0.716
SDH61270.1
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.714
SDG78034.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
   
 
 0.671
Your Current Organism:
Roseospirillum parvum
NCBI taxonomy Id: 83401
Other names: DSM 12498, R. parvum, Roseospirillum parvum Glaeser and Overmann 2001, strain 930I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.