STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH73857.1Methyl-accepting chemotaxis protein/hemerythrin. (142 aa)    
Predicted Functional Partners:
SDH77326.1
Two-component response regulator, FixJ family, consists of REC and HTH domains.
    
  0.777
SDG47315.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
  
  0.761
SDH77125.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
    
  0.751
SDH47221.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
    
  0.730
SDH66202.1
PAS domain S-box-containing protein.
   
 
  0.672
SDG42352.1
Hemerythrin-like metal-binding domain protein.
  
     0.603
SDH81074.1
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
    
   0.457
Your Current Organism:
Roseospirillum parvum
NCBI taxonomy Id: 83401
Other names: DSM 12498, R. parvum, Roseospirillum parvum Glaeser and Overmann 2001, strain 930I
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