STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH77471.1CsbD-like; Belongs to the UPF0337 (CsbD) family. (57 aa)    
Predicted Functional Partners:
SDH04743.1
Lipid-binding SYLF domain-containing protein.
  
    0.790
SDH77364.1
BON domain-containing protein.
  
    0.778
SDH05704.1
Osmotically-inducible protein OsmY, contains BON domain.
  
    0.700
SDH72722.1
Osmotically-inducible protein OsmY, contains BON domain.
  
    0.700
SDG78007.1
Hypothetical protein.
  
    0.687
SDH27279.1
Osmotically inducible protein OsmC.
  
  
 0.687
SDG41550.1
Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family.
 
  
 0.641
SDG69504.1
Photosynthetic reaction center H subunit.
  
    0.525
SDH77438.1
Hypothetical protein.
       0.515
SDG96969.1
Starvation-inducible DNA-binding protein; Belongs to the Dps family.
  
  
 0.449
Your Current Organism:
Roseospirillum parvum
NCBI taxonomy Id: 83401
Other names: DSM 12498, R. parvum, Roseospirillum parvum Glaeser and Overmann 2001, strain 930I
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.