STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH76300.1Antirestriction protein ArdC. (299 aa)    
Predicted Functional Partners:
SDH92893.1
Protein of unknown function.
     0.924
SDH76231.1
Type IV secretion system protein VirD4.
 
    0.792
SDH79870.1
Type IV secretion system protein VirD4.
 
    0.791
SDH90677.1
Type IV secretion system protein VirD4.
 
    0.791
SDH92967.1
Uncharacterized conserved protein, DUF736 family.
  
     0.683
SDH76608.1
Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.
 
     0.601
SDH90775.1
Relaxase/Mobilisation nuclease domain-containing protein.
 
     0.586
SDH95206.1
Hypothetical protein.
 
     0.449
SDH76539.1
Type I restriction enzyme M protein.
       0.436
SDH76503.1
Type I restriction enzyme, S subunit.
       0.405
Your Current Organism:
Roseospirillum parvum
NCBI taxonomy Id: 83401
Other names: DSM 12498, R. parvum, Roseospirillum parvum Glaeser and Overmann 2001, strain 930I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.