STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH80809.1Flagellar biosynthesis regulator FlaF. (115 aa)    
Predicted Functional Partners:
SDH45401.1
Serine/threonine-protein kinase RsbW/sigma-B regulation protein RsbU (phosphoserine phosphatase).
   
    0.882
SDH45447.1
sigma-B regulation protein RsbU (phosphoserine phosphatase).
   
    0.882
SDH35208.1
Flagellar protein FlbT.
  
  
 0.877
SDH22427.1
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
  
 0.779
SDH35167.1
Flagellin FlgL; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
  
 0.779
SDG68415.1
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
   
    0.753
flgK
Flagellar hook-associated protein 1 FlgK.
  
  
 0.709
SDH85668.1
Flagellar hook-associated protein 1 FlgK; Belongs to the flagella basal body rod proteins family.
  
  
 0.709
flgH
Flagellar L-ring protein precursor FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
  
 0.695
SDG89662.1
Chemotaxis protein MotB.
  
    0.689
Your Current Organism:
Roseospirillum parvum
NCBI taxonomy Id: 83401
Other names: DSM 12498, R. parvum, Roseospirillum parvum Glaeser and Overmann 2001, strain 930I
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.