STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH89863.1Hypothetical protein. (262 aa)    
Predicted Functional Partners:
SDH89786.1
MT-A70.
       0.773
SDH89822.1
Hypothetical protein.
       0.773
SDH89901.1
Transcriptional regulator, contains XRE-family HTH domain.
       0.727
SDH90125.1
Hypothetical protein.
       0.717
SDH90170.1
AAA domain-containing protein.
       0.717
SDH90210.1
Putative transposase.
       0.717
SDH90246.1
Hypothetical protein.
       0.717
SDH89939.1
Hypothetical protein.
       0.717
SDH89974.1
dnaA protein helix-turn-helix.
       0.717
SDH90008.1
Hypothetical protein.
       0.717
Your Current Organism:
Roseospirillum parvum
NCBI taxonomy Id: 83401
Other names: DSM 12498, R. parvum, Roseospirillum parvum Glaeser and Overmann 2001, strain 930I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.