STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL43653.1Ktn nad-binding domain involved with k+ transport; silverDB:HdN1F87. (566 aa)    
Predicted Functional Partners:
CBL43654.1
Conserved hypothetical protein; silverDB:HdN1F88.
 
     0.944
hemD
Uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
 
    0.798
moaE
Molybdenum cofactor biosynthesis protein E; silverDB:HdN1F4593.
   
    0.788
CBL46002.1
Putative glutathione-regulated potassium-efflux system K+/H+ antiporter; silverDB:HdN1F3217; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
  
 0.662
purL
Phosphoribosylformylglycinamidine synthase (FGAM synthase); Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
  
  
 0.631
CBL43655.1
Conserved hypothetical protein; silverDB:HdN1F89.
       0.540
CBL44364.1
Conserved hypothetical protein; silverDB:HdN1F1013.
  
  
 0.517
CBL45472.1
Hypothetical protein; silverDB:HdN1F2492.
 
     0.507
korA
2-ketoglutarate: nadp oxidoreductase, alpha subunit; silverDB:HdN1F1254.
  
 
 0.498
CBL45770.1
Hypothetical protein; silverDB:HdN1F2902; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
    0.481
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
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