STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL43678.1Probable diguanylate phosphodiesterase; silverDB:HdN1F127. (408 aa)    
Predicted Functional Partners:
CBL46740.1
Similar to flagellar protein FlaG; silverDB:HdN1F4218.
  
     0.529
cyaA
Adenylate cyclase; silverDB:HdN1F126.
       0.499
CBL43793.1
Hypothetical protein; silverDB:HdN1F285.
  
     0.471
flgA
Flageller protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.
 
     0.468
CBL46172.1
Hypothetical protein; silverDB:HdN1F3460.
     
 0.456
CBL46635.1
Conserved hypothetical protein; silverDB:HdN1F4088.
  
     0.450
CBL47359.1
Hypothetical protein; silverDB:HdN1F5030.
  
     0.432
flgK
Flagellar hook-associated protein 1; silverDB:HdN1F1648.
 
     0.425
flgJ
Flagellum-specific muramidase; silverDB:HdN1F1647.
 
     0.421
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.