STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL43749.1Conserved hypothetical protein; silverDB:HdN1F223. (144 aa)    
Predicted Functional Partners:
CBL43748.1
Conserved hypothetical protein; silverDB:HdN1F222.
   0.974
CBL43750.1
Conserved hypothetical protein; silverDB:HdN1F224.
 
 
 0.945
CBL43752.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; silverDB:HdN1F227.
 
  0.846
tesB-3
Putative CoA-transferase beta subunit, probably TesB; silverDB:HdN1F3675.
 
  
 0.750
CBL46332.1
Predicted acyl-CoA dehydrogenase; silverDB:HdN1F3689.
 
  0.744
CBL43832.1
Oxidoreductase; silverDB:HdN1F338.
 
  0.731
CBL46321.1
CoA-transferase, alpha subunit; silverDB:HdN1F3674.
 
   
 0.720
CBL43841.1
Conserved hypothetical protein; silverDB:HdN1F354.
 
  
 0.718
CBL46330.1
Predicted short-chain dehydrogenase/reductase SDR; silverDB:HdN1F3687; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  0.717
CBL43882.1
acyl-CoA dehydrogenase family protein; silverDB:HdN1F403.
 
  0.712
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.