STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL43818.1Hypothetical protein; silverDB:HdN1F318. (431 aa)    
Predicted Functional Partners:
CBL43817.1
Conserved hypothetical protein; silverDB:HdN1F317.
 
     0.949
CBL43819.1
Predicted exporter of the RND superfamily; silverDB:HdN1F320.
 
     0.916
CBL44575.1
Hypothetical protein; silverDB:HdN1F1304.
 
     0.781
CBL44584.1
Conserved hypothetical protein; silverDB:HdN1F1315.
 
     0.781
CBL43820.1
Predicted UbiA prenyltransferase; silverDB:HdN1F321.
 
     0.639
CBL43823.1
Conserved hypothetical protein; silverDB:HdN1F325.
 
    0.523
CBL43821.1
Peedicted hydroxymethylglutaryl-CoA reductase; silverDB:HdN1F323.
 
     0.513
CBL44676.1
Protein of unknown function (DUF1329); silverDB:HdN1F1429.
 
     0.505
CBL47362.1
Protein of unknown function (DUF1302); silverDB:HdN1F5033.
  
     0.493
CBL44678.1
Conserved hypothetical protein; silverDB:HdN1F1431.
 
     0.475
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.