STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fimT1Pre-pilin like leader sequence; silverDB:HdN1F441. (171 aa)    
Predicted Functional Partners:
CBL43912.1
Probable pilin protein, similar to PilV; silverDB:HdN1F436.
 
  
 0.592
pilY1
Putative type IV fimbrial biogenesis protein PilY1; silverDB:HdN1F573.
 
  
 0.591
pilP
Type IV fimbrial biogenesis protein, involved in pilus assembly; silverDB:HdN1F3102.
  
  
 0.560
dadA
Putative D-amino acid oxidase; silverDB:HdN1F442.
       0.553
pilC
Probable Tfp pilus assembly protein, tip-associated adhesin PilY1; silverDB:HdN1F439.
 
  
 0.547
pilV
Putative type IV fimbrial biogenesis protein, involved in pilus assembly; silverDB:HdN1F570.
 
  
 0.530
pilE1
Type IV fimbrial biogenesis protein; silverDB:HdN1F435.
 
  
 0.519
pilE2
Type IV fimbrial biogenesis protein; silverDB:HdN1F574.
 
  
 0.510
pilO
Fimbrial type-IV assembly protein, involved in pilus assembly; silverDB:HdN1F3101.
 
  
 0.504
pilN
Type IV fimbrial biogenesis protein, involved in pilus assembly; silverDB:HdN1F3100.
 
  
 0.497
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.