STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL43978.1Putative integrase; silverDB:HdN1F505. (669 aa)    
Predicted Functional Partners:
CBL43976.1
Phage integrase; silverDB:HdN1F502.
       0.801
CBL43977.1
Phage integrase, probable truncated; silverDB:HdN1F503.
       0.801
CBL43979.1
Protein kinase; silverDB:HdN1F506.
       0.801
CBL43980.1
Lambda C1 repressor like protein; silverDB:HdN1F507.
       0.590
CBL43981.1
Conserved hypothetical protein; silverDB:HdN1F508.
       0.590
ssb
Single-stranded DNA binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
       0.501
CBL43982.1
Excisionase, phage related; silverDB:HdN1F509.
       0.415
hsdM1
Type I restriction-modification system methyltransferase subunit; silverDB:HdN1F510.
       0.403
hsdS1
Type I restriction-modification system specificity subunit; silverDB:HdN1F511.
       0.403
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.