Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBL44003.1 | CBL44004.1 | HDN1F_04200 | HDN1F_04210 | Hypothetical protein; silverDB:HdN1F534. | Hypothetical protein; silverDB:HdN1F533. | 0.568 |
CBL44003.1 | alkM | HDN1F_04200 | HDN1F_04190 | Hypothetical protein; silverDB:HdN1F534. | Alkane 1-monooxygenase; silverDB:HdN1F532. | 0.682 |
CBL44004.1 | CBL44003.1 | HDN1F_04210 | HDN1F_04200 | Hypothetical protein; silverDB:HdN1F533. | Hypothetical protein; silverDB:HdN1F534. | 0.568 |
CBL44004.1 | alkM | HDN1F_04210 | HDN1F_04190 | Hypothetical protein; silverDB:HdN1F533. | Alkane 1-monooxygenase; silverDB:HdN1F532. | 0.506 |
alkM | CBL44003.1 | HDN1F_04190 | HDN1F_04200 | Alkane 1-monooxygenase; silverDB:HdN1F532. | Hypothetical protein; silverDB:HdN1F534. | 0.682 |
alkM | CBL44004.1 | HDN1F_04190 | HDN1F_04210 | Alkane 1-monooxygenase; silverDB:HdN1F532. | Hypothetical protein; silverDB:HdN1F533. | 0.506 |