STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL44285.1Putative regulatory protein; silverDB:HdN1F906. (466 aa)    
Predicted Functional Partners:
CBL44286.1
High-affinity iron permease; silverDB:HdN1F907.
 
    0.957
tpd
Uncharacterized protein probably involved in high-affinity Fe2+ transport; silverDB:HdN1F903.
 
  
 0.927
CBL44284.1
Conserved hypothetical protein; silverDB:HdN1F905.
 
    0.921
oprB
Carbohydrate-selective porin; silverDB:HdN1F904.
 
     0.716
CBL44777.1
Hypothetical protein; silverDB:HdN1F1566.
 
  
 0.569
CBL44377.1
Putative cytochrome c; silverDB:HdN1F1031.
  
  
 0.539
korC
2-ketoglutarate: NADP oxidoreductase, gamma subunit; silverDB:HdN1F1253.
  
 
 0.498
CBL44066.1
Predicted 4Fe-4S ferredoxin, iron-sulfur binding protein; silverDB:HdN1F609.
  
 
 0.433
CBL45490.1
Hypothetical protein; silverDB:HdN1F2515.
  
     0.433
CBL44844.1
Hypothetical protein; silverDB:HdN1F1658.
  
 
 0.427
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.