STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL44605.1Conserved hypothetical protein; silverDB:HdN1F1340. (327 aa)    
Predicted Functional Partners:
CBL43742.1
Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; silverDB:HdN1F211.
 
  
 0.945
CBL44672.1
Hypothetical protein; silverDB:HdN1F1424.
 
 0.851
CBL43765.1
Response regulator, CheY-like; silverDB:HdN1F245.
 
 0.850
CBL43635.1
GGDEF; silverDB:HdN1F62.
 
 0.841
CBL47039.1
Hypothetical protein; silverDB:HdN1F4601.
 
   0.823
CBL44484.1
Hypothetical protein; silverDB:HdN1F1186.
 
 0.803
CBL46773.1
Conserved hypothetical protein; silverDB:HdN1F4260.
 
    0.796
CBL46261.1
Conserved hypothetical protein; silverDB:HdN1F3586.
 
    0.784
CBL44589.1
Probably signal protein; silverDB:HdN1F1320.
 
 
 0.774
CBL46172.1
Hypothetical protein; silverDB:HdN1F3460.
 
 
0.698
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.