Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBL44651.1 | CBL44652.1 | HDN1F_10680 | HDN1F_10690 | Amp-dependent synthetase and ligase; silverDB:HdN1F1396. | Putative biotin carboxylase protein; silverDB:HdN1F1398. | 0.433 |
CBL44651.1 | CBL44653.1 | HDN1F_10680 | HDN1F_10700 | Amp-dependent synthetase and ligase; silverDB:HdN1F1396. | enoyl-CoA hydratase/isomerase; silverDB:HdN1F1399. | 0.606 |
CBL44651.1 | CBL44654.1 | HDN1F_10680 | HDN1F_10710 | Amp-dependent synthetase and ligase; silverDB:HdN1F1396. | acyl-CoA dehydrogenase; silverDB:HdN1F1400. | 0.936 |
CBL44651.1 | CBL44656.1 | HDN1F_10680 | HDN1F_10730 | Amp-dependent synthetase and ligase; silverDB:HdN1F1396. | Predicted short-chain dehydrogenase; silverDB:HdN1F1404. | 0.931 |
CBL44651.1 | CBL44657.1 | HDN1F_10680 | HDN1F_10740 | Amp-dependent synthetase and ligase; silverDB:HdN1F1396. | Conserved hypothetical protein; silverDB:HdN1F1405. | 0.439 |
CBL44651.1 | CBL46459.1 | HDN1F_10680 | HDN1F_28760 | Amp-dependent synthetase and ligase; silverDB:HdN1F1396. | Acyl-CoA dehydrogenase; silverDB:HdN1F3861. | 0.905 |
CBL44651.1 | CBL46623.1 | HDN1F_10680 | HDN1F_30400 | Amp-dependent synthetase and ligase; silverDB:HdN1F1396. | 3-hydroxyacyl-CoA dehydrogenase; silverDB:HdN1F4074. | 0.611 |
CBL44651.1 | fadB | HDN1F_10680 | HDN1F_10070 | Amp-dependent synthetase and ligase; silverDB:HdN1F1396. | Alpha subunit of fatty acid oxidation complex; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | 0.600 |
CBL44652.1 | CBL44651.1 | HDN1F_10690 | HDN1F_10680 | Putative biotin carboxylase protein; silverDB:HdN1F1398. | Amp-dependent synthetase and ligase; silverDB:HdN1F1396. | 0.433 |
CBL44652.1 | CBL44653.1 | HDN1F_10690 | HDN1F_10700 | Putative biotin carboxylase protein; silverDB:HdN1F1398. | enoyl-CoA hydratase/isomerase; silverDB:HdN1F1399. | 0.980 |
CBL44652.1 | CBL44654.1 | HDN1F_10690 | HDN1F_10710 | Putative biotin carboxylase protein; silverDB:HdN1F1398. | acyl-CoA dehydrogenase; silverDB:HdN1F1400. | 0.973 |
CBL44652.1 | CBL44655.1 | HDN1F_10690 | HDN1F_10720 | Putative biotin carboxylase protein; silverDB:HdN1F1398. | Carboxyl transferase; silverDB:HdN1F1402. | 0.997 |
CBL44652.1 | CBL44656.1 | HDN1F_10690 | HDN1F_10730 | Putative biotin carboxylase protein; silverDB:HdN1F1398. | Predicted short-chain dehydrogenase; silverDB:HdN1F1404. | 0.572 |
CBL44652.1 | CBL44657.1 | HDN1F_10690 | HDN1F_10740 | Putative biotin carboxylase protein; silverDB:HdN1F1398. | Conserved hypothetical protein; silverDB:HdN1F1405. | 0.711 |
CBL44652.1 | CBL46459.1 | HDN1F_10690 | HDN1F_28760 | Putative biotin carboxylase protein; silverDB:HdN1F1398. | Acyl-CoA dehydrogenase; silverDB:HdN1F3861. | 0.916 |
CBL44652.1 | CBL46623.1 | HDN1F_10690 | HDN1F_30400 | Putative biotin carboxylase protein; silverDB:HdN1F1398. | 3-hydroxyacyl-CoA dehydrogenase; silverDB:HdN1F4074. | 0.535 |
CBL44652.1 | fadB | HDN1F_10690 | HDN1F_10070 | Putative biotin carboxylase protein; silverDB:HdN1F1398. | Alpha subunit of fatty acid oxidation complex; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | 0.535 |
CBL44653.1 | CBL44651.1 | HDN1F_10700 | HDN1F_10680 | enoyl-CoA hydratase/isomerase; silverDB:HdN1F1399. | Amp-dependent synthetase and ligase; silverDB:HdN1F1396. | 0.606 |
CBL44653.1 | CBL44652.1 | HDN1F_10700 | HDN1F_10690 | enoyl-CoA hydratase/isomerase; silverDB:HdN1F1399. | Putative biotin carboxylase protein; silverDB:HdN1F1398. | 0.980 |
CBL44653.1 | CBL44654.1 | HDN1F_10700 | HDN1F_10710 | enoyl-CoA hydratase/isomerase; silverDB:HdN1F1399. | acyl-CoA dehydrogenase; silverDB:HdN1F1400. | 0.903 |
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