STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL44690.1Aldehyde dehydrogenase; silverDB:HdN1F1446; Belongs to the aldehyde dehydrogenase family. (555 aa)    
Predicted Functional Partners:
CBL44689.1
Probable sterol desaturase; silverDB:HdN1F1445.
   
   0.735
CBL44691.1
Glucose-methanol-choline oxidoreductase; silverDB:HdN1F1447.
 
  
 0.734
CBL45097.1
Non-ribosomal peptide synthase; silverDB:HdN1F2001.
  
 
 0.602
fmt
Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
    
 0.583
CBL45096.1
Non-ribosomal peptide synthetase modules and related proteins; silverDB:HdN1F1999.
  
 
 0.579
eryA
Erythronolide synthase, modules 3 and 4; silverDB:HdN1F1309.
  
 
 0.567
CBL45645.1
Nadp-dependent malic enzyme; silverDB:HdN1F2722.
  
  
 0.556
cbrA
Two-component sensor; silverDB:HdN1F538.
  
  
 0.551
CBL45095.1
Non-ribosomal peptide synthetase modules and related proteins; silverDB:HdN1F1998.
  
 
 0.543
CBL44688.1
3-beta hydroxysteroid dehydrogenase/isomerase family protein; silverDB:HdN1F1443.
     
 0.518
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.