Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBL44759.1 | CBL44760.1 | HDN1F_11760 | HDN1F_11770 | Nitroreductase family protein; silverDB:HdN1F1539. | Hypothetical protein; silverDB:HdN1F1540. | 0.456 |
CBL44759.1 | CBL45096.1 | HDN1F_11760 | HDN1F_15130 | Nitroreductase family protein; silverDB:HdN1F1539. | Non-ribosomal peptide synthetase modules and related proteins; silverDB:HdN1F1999. | 0.651 |
CBL44759.1 | CBL45097.1 | HDN1F_11760 | HDN1F_15140 | Nitroreductase family protein; silverDB:HdN1F1539. | Non-ribosomal peptide synthase; silverDB:HdN1F2001. | 0.662 |
CBL44760.1 | CBL44759.1 | HDN1F_11770 | HDN1F_11760 | Hypothetical protein; silverDB:HdN1F1540. | Nitroreductase family protein; silverDB:HdN1F1539. | 0.456 |
CBL44760.1 | CBL44762.1 | HDN1F_11770 | HDN1F_11790 | Hypothetical protein; silverDB:HdN1F1540. | Enoyl-CoA hydratase/isomerase; silverDB:HdN1F1544. | 0.504 |
CBL44760.1 | CBL45096.1 | HDN1F_11770 | HDN1F_15130 | Hypothetical protein; silverDB:HdN1F1540. | Non-ribosomal peptide synthetase modules and related proteins; silverDB:HdN1F1999. | 0.512 |
CBL44760.1 | CBL45097.1 | HDN1F_11770 | HDN1F_15140 | Hypothetical protein; silverDB:HdN1F1540. | Non-ribosomal peptide synthase; silverDB:HdN1F2001. | 0.532 |
CBL44760.1 | CBL46153.1 | HDN1F_11770 | HDN1F_25700 | Hypothetical protein; silverDB:HdN1F1540. | Hypothetical protein; silverDB:HdN1F3434. | 0.524 |
CBL44760.1 | CBL46623.1 | HDN1F_11770 | HDN1F_30400 | Hypothetical protein; silverDB:HdN1F1540. | 3-hydroxyacyl-CoA dehydrogenase; silverDB:HdN1F4074. | 0.551 |
CBL44760.1 | CBL46791.1 | HDN1F_11770 | HDN1F_32080 | Hypothetical protein; silverDB:HdN1F1540. | Thiolase; silverDB:HdN1F4287; Belongs to the thiolase-like superfamily. Thiolase family. | 0.472 |
CBL44760.1 | eryA | HDN1F_11770 | HDN1F_09950 | Hypothetical protein; silverDB:HdN1F1540. | Erythronolide synthase, modules 3 and 4; silverDB:HdN1F1309. | 0.568 |
CBL44760.1 | fadB | HDN1F_11770 | HDN1F_10070 | Hypothetical protein; silverDB:HdN1F1540. | Alpha subunit of fatty acid oxidation complex; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | 0.551 |
CBL44760.1 | katA | HDN1F_11770 | HDN1F_12050 | Hypothetical protein; silverDB:HdN1F1540. | Catalase; silverDB:HdN1F1582; Belongs to the catalase family. | 0.549 |
CBL44762.1 | CBL44760.1 | HDN1F_11790 | HDN1F_11770 | Enoyl-CoA hydratase/isomerase; silverDB:HdN1F1544. | Hypothetical protein; silverDB:HdN1F1540. | 0.504 |
CBL44762.1 | CBL45096.1 | HDN1F_11790 | HDN1F_15130 | Enoyl-CoA hydratase/isomerase; silverDB:HdN1F1544. | Non-ribosomal peptide synthetase modules and related proteins; silverDB:HdN1F1999. | 0.732 |
CBL44762.1 | CBL45097.1 | HDN1F_11790 | HDN1F_15140 | Enoyl-CoA hydratase/isomerase; silverDB:HdN1F1544. | Non-ribosomal peptide synthase; silverDB:HdN1F2001. | 0.768 |
CBL44762.1 | CBL46153.1 | HDN1F_11790 | HDN1F_25700 | Enoyl-CoA hydratase/isomerase; silverDB:HdN1F1544. | Hypothetical protein; silverDB:HdN1F3434. | 0.450 |
CBL44762.1 | CBL46623.1 | HDN1F_11790 | HDN1F_30400 | Enoyl-CoA hydratase/isomerase; silverDB:HdN1F1544. | 3-hydroxyacyl-CoA dehydrogenase; silverDB:HdN1F4074. | 0.505 |
CBL44762.1 | CBL46791.1 | HDN1F_11790 | HDN1F_32080 | Enoyl-CoA hydratase/isomerase; silverDB:HdN1F1544. | Thiolase; silverDB:HdN1F4287; Belongs to the thiolase-like superfamily. Thiolase family. | 0.634 |
CBL44762.1 | eryA | HDN1F_11790 | HDN1F_09950 | Enoyl-CoA hydratase/isomerase; silverDB:HdN1F1544. | Erythronolide synthase, modules 3 and 4; silverDB:HdN1F1309. | 0.712 |
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