STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccoQProbable cytochrome c oxidase, subunit CcoQ; silverDB:HdN1F1570. (76 aa)    
Predicted Functional Partners:
ccoO
Cytochrome c oxidase, cbb3-type, subunit II; silverDB:HdN1F1571.
 
 
 0.996
ccoN
Cytochrome c oxidase, Cbb3-type, subunit I; silverDB:HdN1F1572; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.995
ccoP
Cytochrome c oxidase cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
 0.993
ccoN-2
Cytochrome-cbb3 oxidase, subunit I; silverDB:HdN1F3650; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.982
ccoO-2
Cytochrome-cbb3 oxidase, subunit I; silverDB:HdN1F3651.
 
 
 0.981
ccoP-2
Cytochrome-cbb3 oxidase, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
 0.967
ccoQ-2
Cytochrome c oxidase subunit; silverDB:HdN1F3652.
     
  0.900
CBL44775.1
Hypothetical protein; silverDB:HdN1F1564.
 
  
 0.808
CBL44778.1
4fe-4s ferredoxin, iron-sulfur binding protein; silverDB:HdN1F1567.
 
  
 0.803
CBL44777.1
Hypothetical protein; silverDB:HdN1F1566.
 
     0.767
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.