STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hcP-2Protein of unknown function (DUF796); silverDB:HdN1F1587. (164 aa)    
Predicted Functional Partners:
CBL44793.1
Hypothetical protein; silverDB:HdN1F1589.
 
 
 0.974
CBL44800.1
Protein of unknown function (DUF770); silverDB:HdN1F1600.
 
 
 0.973
CBL44799.1
Protein of unknown function (DUF877); silverDB:HdN1F1599.
 
 
 0.972
CBL44798.1
Conserved hypothetical protein; silverDB:HdN1F1598.
 
  
 
0.946
CBL44790.1
Bacterial protein of unknown function (DUF879); silverDB:HdN1F1585.
 
  
 0.933
CBL44794.1
Conserved hypothetical protein; silverDB:HdN1F1591.
 
  
 0.921
CBL44795.1
Hypothetical protein; silverDB:HdN1F1593.
 
  
 0.919
CBL44789.1
Hypothetical protein; silverDB:HdN1F1584.
 
  
 0.902
CBL44796.1
Bacterial protein of unknown function (DUF876); silverDB:HdN1F1596.
 
  
 0.897
CBL44812.1
Hypothetical protein; silverDB:HdN1F1615.
 
  
 0.862
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.