STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL44869.1Hypothetical protein; silverDB:HdN1F1695. (101 aa)    
Predicted Functional Partners:
CBL46965.1
Anti-anti-sigma regulatory factor; silverDB:HdN1F4501.
  
     0.760
nlpB
Predicted outer membrane uncharacterized lipoprotein; silverDB:HdN1F4398.
  
     0.729
CBL44232.1
Protein of unknown function DUF1043; silverDB:HdN1F832.
  
     0.716
CBL46964.1
Response regulator receiver; silverDB:HdN1F4500.
  
     0.708
CBL44664.1
Conserved hypothetical protein; silverDB:HdN1F1414.
  
     0.697
CBL46387.1
Hypothetical protein; silverDB:HdN1F3766.
  
     0.694
CBL47230.1
Transcriptional regulator, ArsR family; silverDB:HdN1F4857.
  
     0.689
CBL44673.1
Conserved hypothetical protein; silverDB:HdN1F1425.
  
    0.684
CBL45983.1
Hypothetical protein; silverDB:HdN1F3188.
  
     0.681
CBL47225.1
Conserved hypothetical protein; silverDB:HdN1F4851.
  
     0.677
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.