STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL44884.1Acriflavin resistance protein; silverDB:HdN1F1719; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1043 aa)    
Predicted Functional Partners:
CBL44885.1
HlyD family secretion protein; silverDB:HdN1F1720; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.972
CBL45722.1
HlyD family secretion protein; silverDB:HdN1F2834; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.729
CBL44543.1
HlyD family secretion protein; silverDB:HdN1F1259; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.680
CBL46522.1
HlyD family secretion protein; silverDB:HdN1F3955; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.603
CBL47217.1
Putative HlyD-like secretion protein; silverDB:HdN1F4841; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.566
CBL43888.1
HlyD family secretion protein; silverDB:HdN1F410; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.560
CBL45734.1
HlyD family secretion protein; silverDB:HdN1F2851; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.536
CBL44075.1
HlyD family secretion protein; silverDB:HdN1F625; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.531
CBL45973.1
Hypothetical protein; silverDB:HdN1F3176; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.527
yajC
Sec-system component preprotein translocase subunit; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.
  
 
 
 0.472
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
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