STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
btuEGlutathione peroxidase; silverDB:HdN1F1789; Belongs to the glutathione peroxidase family. (163 aa)    
Predicted Functional Partners:
gor
Glutathione-disulfide reductase; silverDB:HdN1F2244.
  
 0.937
ggt
Gamma-glutamyltranspeptidase precursor; silverDB:HdN1F671.
    
 0.923
gshB
Glutathione synthetase; silverDB:HdN1F4907; Belongs to the prokaryotic GSH synthase family.
    
 0.921
gst-3
Glutathione S-transferase; silverDB:HdN1F2513.
  
 
 0.917
gst-2
Glutathione S-transferase; silverDB:HdN1F1268; Belongs to the GST superfamily.
   
 
 0.916
ccmG
Cytochrome c-type biogenesis protein; silverDB:HdN1F3815.
   
 0.726
katA
Catalase; silverDB:HdN1F1582; Belongs to the catalase family.
  
 
 0.635
ahpC
Alkyl hydroperoxide reductase subunit C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
   
 
 0.545
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
 0.529
msrB
Peptide methionine sulfoxide reductase; silverDB:HdN1F1787; Belongs to the MsrB Met sulfoxide reductase family.
  
  
 0.483
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
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