STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL45002.1Glycosyl transferase; silverDB:HdN1F1874. (516 aa)    
Predicted Functional Partners:
ppnP
Protein of unknown function (DUF1255); Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.
     
 0.911
CBL45001.1
Ribose-phosphate pyrophosphokinase; silverDB:HdN1F1873; Belongs to the ribose-phosphate pyrophosphokinase family.
 
   
 0.902
CBL45484.1
HAD-superfamily hydrolase subfamily IA, variant 3; silverDB:HdN1F2509.
   
 
  0.902
CBL45259.1
5-nucleotidase; silverDB:HdN1F2212.
     
  0.900
CBL46776.1
Conserved hypothetical protein; silverDB:HdN1F4265.
     
  0.900
CBL46780.1
Predicted hydrolase of HD superfamily; silverDB:HdN1F4271.
     
  0.900
CBL44863.1
Metallo-beta-lactamase superfamily protein; silverDB:HdN1F1686.
    0.732
era
Small GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
  
    0.613
CBL44888.1
Hypothetical protein; silverDB:HdN1F1724.
  
    0.613
CBL45003.1
Conserved hypothetical protein; silverDB:HdN1F1876.
       0.545
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.