STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
motBFlagellar motor protein MotB; silverDB:HdN1F1963. (359 aa)    
Predicted Functional Partners:
motA1
Flagellar motor protein MotA; silverDB:HdN1F1962.
 
 0.996
motA2
Flagellar motor component; silverDB:HdN1F2494.
  
 0.965
CBL46169.1
Hypothetical protein; silverDB:HdN1F3455.
  
  
 
0.928
motB-2
Chemotaxis protein MotB; silverDB:HdN1F2497.
     
 0.904
flgC
Flagellar basal-body rod protein FlgC; silverDB:HdN1F1496; Belongs to the flagella basal body rod proteins family.
 
  
 0.844
fliG
Flagellar motor switch protein; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
  
 0.812
flgK
Flagellar hook-associated protein 1; silverDB:HdN1F1648.
 
  
 0.809
flhA
Flagellar biosynthesis protein; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
 
  
 0.805
cheW-2
Predicted CheW-like protein; silverDB:HdN1F1966.
  
  
 0.804
fliP
Flagellar transport protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
  
 0.795
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.