STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL45405.1Hypothetical protein; silverDB:HdN1F2412. (164 aa)    
Predicted Functional Partners:
CBL45403.1
Hypothetical protein; silverDB:HdN1F2408.
 
     0.876
CBL45401.1
Hypothetical protein; silverDB:HdN1F2406.
 
     0.868
CBL45399.1
Hypothetical protein; silverDB:HdN1F2404.
 
     0.864
CBL45400.1
Conserved hypothetical protein; silverDB:HdN1F2405.
 
     0.864
CBL45402.1
Hypothetical protein; silverDB:HdN1F2407.
 
     0.857
CBL45407.1
Conserved hypothetical protein; silverDB:HdN1F2414.
 
   
 0.847
CBL45394.1
Conserved hypothetical protein; silverDB:HdN1F2397.
 
     0.821
CBL45392.1
Hypothetical protein; silverDB:HdN1F2395.
 
     0.819
CBL45393.1
Hypothetical protein; silverDB:HdN1F2396.
 
     0.819
CBL45385.1
Hypothetical protein; silverDB:HdN1F2388.
 
     0.808
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.