STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL45561.1Putative enoyl-CoA hydratase; silverDB:HdN1F2608. (261 aa)    
Predicted Functional Partners:
hmgL
Hydroxymethylglutaryl-CoA lyase; silverDB:HdN1F76; Belongs to the alpha-IPM synthase/homocitrate synthase family.
 0.989
purK
Phosphoribosylaminoimidazole carboxylase, ATPase subunit; silverDB:HdN1F2611.
   
 0.978
CBL47007.1
Predicted acetyl-CoA carboxylase; silverDB:HdN1F4561.
 
 0.945
CBL47006.1
Putative acyl-CoA carboxylase alpha chain protein; silverDB:HdN1F4559.
   
 0.907
CBL45563.1
Acyl-CoA dehydrogenase; silverDB:HdN1F2612.
 
  0.887
acdH
Acyl-CoA dehydrogenase; silverDB:HdN1F2603.
 
  0.820
fadB
Alpha subunit of fatty acid oxidation complex; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
0.768
CBL45097.1
Non-ribosomal peptide synthase; silverDB:HdN1F2001.
  
 
 0.768
CBL45560.1
Propionyl-CoA carboxylase; silverDB:HdN1F2607.
 
 
 0.767
CBL44396.1
Acyl-CoA dehydrogenase; silverDB:HdN1F1058.
 
  0.763
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
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