Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBL43976.1 | CBL43977.1 | HDN1F_03930 | HDN1F_03940 | Phage integrase; silverDB:HdN1F502. | Phage integrase, probable truncated; silverDB:HdN1F503. | 0.953 |
CBL43976.1 | CBL45872.1 | HDN1F_03930 | HDN1F_22890 | Phage integrase; silverDB:HdN1F502. | Conserved hypothetical protein; silverDB:HdN1F3041. | 0.439 |
CBL43977.1 | CBL43976.1 | HDN1F_03940 | HDN1F_03930 | Phage integrase, probable truncated; silverDB:HdN1F503. | Phage integrase; silverDB:HdN1F502. | 0.953 |
CBL43977.1 | CBL45872.1 | HDN1F_03940 | HDN1F_22890 | Phage integrase, probable truncated; silverDB:HdN1F503. | Conserved hypothetical protein; silverDB:HdN1F3041. | 0.460 |
CBL45870.1 | CBL45871.1 | HDN1F_22870 | HDN1F_22880 | Hypothetical protein; silverDB:HdN1F3038. | Hypothetical protein; silverDB:HdN1F3040. | 0.773 |
CBL45870.1 | CBL45872.1 | HDN1F_22870 | HDN1F_22890 | Hypothetical protein; silverDB:HdN1F3038. | Conserved hypothetical protein; silverDB:HdN1F3041. | 0.432 |
CBL45870.1 | CBL45873.1 | HDN1F_22870 | HDN1F_22900 | Hypothetical protein; silverDB:HdN1F3038. | Helicase, C-terminal domain; silverDB:HdN1F3042. | 0.425 |
CBL45870.1 | CBL45874.1 | HDN1F_22870 | HDN1F_22910 | Hypothetical protein; silverDB:HdN1F3038. | Hypothetical protein; silverDB:HdN1F3043. | 0.420 |
CBL45871.1 | CBL45870.1 | HDN1F_22880 | HDN1F_22870 | Hypothetical protein; silverDB:HdN1F3040. | Hypothetical protein; silverDB:HdN1F3038. | 0.773 |
CBL45871.1 | CBL45872.1 | HDN1F_22880 | HDN1F_22890 | Hypothetical protein; silverDB:HdN1F3040. | Conserved hypothetical protein; silverDB:HdN1F3041. | 0.432 |
CBL45871.1 | CBL45873.1 | HDN1F_22880 | HDN1F_22900 | Hypothetical protein; silverDB:HdN1F3040. | Helicase, C-terminal domain; silverDB:HdN1F3042. | 0.420 |
CBL45871.1 | CBL45874.1 | HDN1F_22880 | HDN1F_22910 | Hypothetical protein; silverDB:HdN1F3040. | Hypothetical protein; silverDB:HdN1F3043. | 0.420 |
CBL45872.1 | CBL43976.1 | HDN1F_22890 | HDN1F_03930 | Conserved hypothetical protein; silverDB:HdN1F3041. | Phage integrase; silverDB:HdN1F502. | 0.439 |
CBL45872.1 | CBL43977.1 | HDN1F_22890 | HDN1F_03940 | Conserved hypothetical protein; silverDB:HdN1F3041. | Phage integrase, probable truncated; silverDB:HdN1F503. | 0.460 |
CBL45872.1 | CBL45870.1 | HDN1F_22890 | HDN1F_22870 | Conserved hypothetical protein; silverDB:HdN1F3041. | Hypothetical protein; silverDB:HdN1F3038. | 0.432 |
CBL45872.1 | CBL45871.1 | HDN1F_22890 | HDN1F_22880 | Conserved hypothetical protein; silverDB:HdN1F3041. | Hypothetical protein; silverDB:HdN1F3040. | 0.432 |
CBL45872.1 | CBL45873.1 | HDN1F_22890 | HDN1F_22900 | Conserved hypothetical protein; silverDB:HdN1F3041. | Helicase, C-terminal domain; silverDB:HdN1F3042. | 0.753 |
CBL45872.1 | CBL45874.1 | HDN1F_22890 | HDN1F_22910 | Conserved hypothetical protein; silverDB:HdN1F3041. | Hypothetical protein; silverDB:HdN1F3043. | 0.764 |
CBL45872.1 | CBL45875.1 | HDN1F_22890 | HDN1F_22920 | Conserved hypothetical protein; silverDB:HdN1F3041. | Type III DNA modification methyltransferase; silverDB:HdN1F3044. | 0.715 |
CBL45872.1 | CBL45876.1 | HDN1F_22890 | HDN1F_22930 | Conserved hypothetical protein; silverDB:HdN1F3041. | Type III restriction enzyme, res subunit; silverDB:HdN1F3046. | 0.476 |
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