STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL45943.1Conserved hypothetical protein; silverDB:HdN1F3136. (136 aa)    
Predicted Functional Partners:
narX
Nitrate/nitrite sensor kinase; silverDB:HdN1F1748.
 
     0.468
CBL45942.1
Phosphoribosyl-ATP pyrophosphohydrolase; silverDB:HdN1F3135.
       0.437
CBL45944.1
Putative plasmid stability protein, similar to RelE; silverDB:HdN1F3139.
       0.428
narK2
Nitrate/nitrite antiporter; silverDB:HdN1F1750.
 
     0.420
CBL45939.1
Hypothetical protein; silverDB:HdN1F3129.
 
     0.407
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.