STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fabB1Predicted 3-oxoacyl-(Acyl-carrier-protein) synthase; silverDB:HdN1F3300; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (405 aa)    
Predicted Functional Partners:
fabG1
Short-chain dehydrogenase/reductase SDR superfamily; silverDB:HdN1F3298.
 
 0.995
fabD
Malonyl CoA-[acyl carrier protein] transacylase; silverDB:HdN1F4438.
 
 0.989
fabF2
3-oxoacyl-(Acyl-carrier-protein) synthase II; silverDB:HdN1F3297; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  
 
0.983
fabA1
Predicted 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase; silverDB:HdN1F3299.
   
 0.959
CBL46913.1
3-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 0.955
CBL46066.1
Predicted AMP-dependent synthetase and ligase; silverDB:HdN1F3308.
 
 
 0.948
CBL46394.1
Short-chain dehydrogenase; silverDB:HdN1F3769.
 
 0.948
CBL46071.1
Conserved hypothetical protein; silverDB:HdN1F3313.
 
 
 
 0.943
CBL43842.1
Short-chain dehydrogenase/reductase SDR; silverDB:HdN1F355.
 
 0.942
fabG2
Short-chain dehydrogenase/reductase SDR superfamily; silverDB:HdN1F4286.
 
 0.939
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.