STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cobBCobyrinic acid a,c-diamide synthase family protein; silverDB:HdN1F3512. (441 aa)    
Predicted Functional Partners:
cobO
Cob(I)alamin adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.
 
 
 0.988
cobH
Precorrin-8X methylmutase; silverDB:HdN1F3513.
 
 0.971
cobN
Cobaltochelatase; silverDB:HdN1F3526.
 
 
 0.969
CBL46182.1
Predicted CobN/magnesium chelatase; silverDB:HdN1F3475.
 
 
 0.959
cobQ
Cobyric acid synthase, amidation of sidechains b, d, e and g; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
  
 0.956
cobT
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
  
 0.947
cobJ
Precorrin-3B C17-methyltransferase; silverDB:HdN1F3516.
 
  
 0.924
pduO
ATP:cob(I)alamin adenosyltransferase; silverDB:HdN1F1071; Belongs to the Cob(I)alamin adenosyltransferase family.
    
 0.917
cobU
Cobinamide kinase; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate.
 
  
 0.911
cobM
Precorrin-4 C(11)-methyltransferase; silverDB:HdN1F3522.
 
  
 0.898
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
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