Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBL45071.1 | CBL45072.1 | HDN1F_14880 | HDN1F_14890 | CheW-like protein; silverDB:HdN1F1967. | CheW-like protein; silverDB:HdN1F1969. | 0.779 |
CBL45071.1 | CBL45498.1 | HDN1F_14880 | HDN1F_19150 | CheW-like protein; silverDB:HdN1F1967. | Hypothetical protein; silverDB:HdN1F2526. | 0.980 |
CBL45071.1 | CBL45601.1 | HDN1F_14880 | HDN1F_20180 | CheW-like protein; silverDB:HdN1F1967. | Hypothetical protein; silverDB:HdN1F2662. | 0.974 |
CBL45071.1 | CBL45641.1 | HDN1F_14880 | HDN1F_20580 | CheW-like protein; silverDB:HdN1F1967. | Putative signal transduction histidine kinase; silverDB:HdN1F2714. | 0.978 |
CBL45071.1 | CBL46335.1 | HDN1F_14880 | HDN1F_27520 | CheW-like protein; silverDB:HdN1F1967. | Histidine kinase, chemotaxis sensory transducer; silverDB:HdN1F3694. | 0.944 |
CBL45071.1 | CBL46814.1 | HDN1F_14880 | HDN1F_32310 | CheW-like protein; silverDB:HdN1F1967. | Chemotaxis protein methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.796 |
CBL45071.1 | cheA | HDN1F_14880 | HDN1F_01790 | CheW-like protein; silverDB:HdN1F1967. | Predicted chemotaxis protein histidine kinase; silverDB:HdN1F240. | 0.978 |
CBL45071.1 | cheA-2 | HDN1F_14880 | HDN1F_14820 | CheW-like protein; silverDB:HdN1F1967. | Sensor histidine kinase CheA; silverDB:HdN1F1959. | 0.987 |
CBL45072.1 | CBL45071.1 | HDN1F_14890 | HDN1F_14880 | CheW-like protein; silverDB:HdN1F1969. | CheW-like protein; silverDB:HdN1F1967. | 0.779 |
CBL45072.1 | CBL45498.1 | HDN1F_14890 | HDN1F_19150 | CheW-like protein; silverDB:HdN1F1969. | Hypothetical protein; silverDB:HdN1F2526. | 0.981 |
CBL45072.1 | CBL45601.1 | HDN1F_14890 | HDN1F_20180 | CheW-like protein; silverDB:HdN1F1969. | Hypothetical protein; silverDB:HdN1F2662. | 0.978 |
CBL45072.1 | CBL45641.1 | HDN1F_14890 | HDN1F_20580 | CheW-like protein; silverDB:HdN1F1969. | Putative signal transduction histidine kinase; silverDB:HdN1F2714. | 0.981 |
CBL45072.1 | CBL46335.1 | HDN1F_14890 | HDN1F_27520 | CheW-like protein; silverDB:HdN1F1969. | Histidine kinase, chemotaxis sensory transducer; silverDB:HdN1F3694. | 0.949 |
CBL45072.1 | CBL46814.1 | HDN1F_14890 | HDN1F_32310 | CheW-like protein; silverDB:HdN1F1969. | Chemotaxis protein methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.823 |
CBL45072.1 | cheA | HDN1F_14890 | HDN1F_01790 | CheW-like protein; silverDB:HdN1F1969. | Predicted chemotaxis protein histidine kinase; silverDB:HdN1F240. | 0.980 |
CBL45072.1 | cheA-2 | HDN1F_14890 | HDN1F_14820 | CheW-like protein; silverDB:HdN1F1969. | Sensor histidine kinase CheA; silverDB:HdN1F1959. | 0.987 |
CBL45498.1 | CBL45071.1 | HDN1F_19150 | HDN1F_14880 | Hypothetical protein; silverDB:HdN1F2526. | CheW-like protein; silverDB:HdN1F1967. | 0.980 |
CBL45498.1 | CBL45072.1 | HDN1F_19150 | HDN1F_14890 | Hypothetical protein; silverDB:HdN1F2526. | CheW-like protein; silverDB:HdN1F1969. | 0.981 |
CBL45498.1 | CBL45500.1 | HDN1F_19150 | HDN1F_19170 | Hypothetical protein; silverDB:HdN1F2526. | CheW-like protein; silverDB:HdN1F2528. | 0.989 |
CBL45498.1 | CBL46335.1 | HDN1F_19150 | HDN1F_27520 | Hypothetical protein; silverDB:HdN1F2526. | Histidine kinase, chemotaxis sensory transducer; silverDB:HdN1F3694. | 0.955 |
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