Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBL43663.1 | CBL43830.1 | HDN1F_00800 | HDN1F_02470 | Predicted histidine kinase; silverDB:HdN1F103. | Hypothetical protein; silverDB:HdN1F335. | 0.969 |
CBL43663.1 | CBL44589.1 | HDN1F_00800 | HDN1F_10060 | Predicted histidine kinase; silverDB:HdN1F103. | Probably signal protein; silverDB:HdN1F1320. | 0.947 |
CBL43663.1 | CBL45650.1 | HDN1F_00800 | HDN1F_20670 | Predicted histidine kinase; silverDB:HdN1F103. | Hypothetical protein; silverDB:HdN1F2731. | 0.994 |
CBL43663.1 | CBL45728.1 | HDN1F_00800 | HDN1F_21450 | Predicted histidine kinase; silverDB:HdN1F103. | Probable signal protein; silverDB:HdN1F2843. | 0.894 |
CBL43663.1 | CBL46172.1 | HDN1F_00800 | HDN1F_25890 | Predicted histidine kinase; silverDB:HdN1F103. | Hypothetical protein; silverDB:HdN1F3460. | 0.982 |
CBL43663.1 | CBL46399.1 | HDN1F_00800 | HDN1F_28160 | Predicted histidine kinase; silverDB:HdN1F103. | Hypothetical protein; silverDB:HdN1F3775. | 0.857 |
CBL43663.1 | CBL46454.1 | HDN1F_00800 | HDN1F_28710 | Predicted histidine kinase; silverDB:HdN1F103. | Response regulator receiver; silverDB:HdN1F3854. | 0.998 |
CBL43663.1 | CBL46829.1 | HDN1F_00800 | HDN1F_32460 | Predicted histidine kinase; silverDB:HdN1F103. | Conserved hypothetical protein; silverDB:HdN1F4337. | 0.980 |
CBL43663.1 | cheY-2 | HDN1F_00800 | HDN1F_37190 | Predicted histidine kinase; silverDB:HdN1F103. | Signal transduction histidine kinase; silverDB:HdN1F4951. | 0.997 |
CBL43830.1 | CBL43663.1 | HDN1F_02470 | HDN1F_00800 | Hypothetical protein; silverDB:HdN1F335. | Predicted histidine kinase; silverDB:HdN1F103. | 0.969 |
CBL43830.1 | CBL44589.1 | HDN1F_02470 | HDN1F_10060 | Hypothetical protein; silverDB:HdN1F335. | Probably signal protein; silverDB:HdN1F1320. | 0.885 |
CBL43830.1 | CBL44880.1 | HDN1F_02470 | HDN1F_12970 | Hypothetical protein; silverDB:HdN1F335. | Hypothetical protein; silverDB:HdN1F1712. | 0.832 |
CBL43830.1 | CBL45650.1 | HDN1F_02470 | HDN1F_20670 | Hypothetical protein; silverDB:HdN1F335. | Hypothetical protein; silverDB:HdN1F2731. | 0.949 |
CBL43830.1 | CBL45728.1 | HDN1F_02470 | HDN1F_21450 | Hypothetical protein; silverDB:HdN1F335. | Probable signal protein; silverDB:HdN1F2843. | 0.650 |
CBL43830.1 | CBL46172.1 | HDN1F_02470 | HDN1F_25890 | Hypothetical protein; silverDB:HdN1F335. | Hypothetical protein; silverDB:HdN1F3460. | 0.940 |
CBL43830.1 | CBL46399.1 | HDN1F_02470 | HDN1F_28160 | Hypothetical protein; silverDB:HdN1F335. | Hypothetical protein; silverDB:HdN1F3775. | 0.782 |
CBL43830.1 | CBL46454.1 | HDN1F_02470 | HDN1F_28710 | Hypothetical protein; silverDB:HdN1F335. | Response regulator receiver; silverDB:HdN1F3854. | 0.987 |
CBL43830.1 | CBL46829.1 | HDN1F_02470 | HDN1F_32460 | Hypothetical protein; silverDB:HdN1F335. | Conserved hypothetical protein; silverDB:HdN1F4337. | 0.973 |
CBL43830.1 | cheY-2 | HDN1F_02470 | HDN1F_37190 | Hypothetical protein; silverDB:HdN1F335. | Signal transduction histidine kinase; silverDB:HdN1F4951. | 0.950 |
CBL44589.1 | CBL43663.1 | HDN1F_10060 | HDN1F_00800 | Probably signal protein; silverDB:HdN1F1320. | Predicted histidine kinase; silverDB:HdN1F103. | 0.947 |
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