STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL46463.1Sodium/alanine symporter family protein; silverDB:HdN1F3870. (455 aa)    
Predicted Functional Partners:
CBL46283.1
Sodium-and chloride-dependent transporter; silverDB:HdN1F3619; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
 
  
 0.713
CBL46462.1
Putative transporter; silverDB:HdN1F3868.
  
  
 0.576
CBL46640.1
Putative transporter, NadC family; silverDB:HdN1F4098.
 
  
 0.494
cbrA
Two-component sensor; silverDB:HdN1F538.
   
  
 0.453
gltA
Citrate synthase; silverDB:HdN1F2065; Belongs to the citrate synthase family.
   
  
 0.404
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.