STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL46777.1Acetyl-CoA hydrolase; silverDB:HdN1F4266. (723 aa)    
Predicted Functional Partners:
smbA
Methylmalonyl-CoA mutase, alpha subunit; silverDB:HdN1F2121.
  
  
 0.707
sbmB
Methylmalonyl-CoA mutase, beta subunit; silverDB:HdN1F4614.
  
  
 0.707
gltA
Citrate synthase; silverDB:HdN1F2065; Belongs to the citrate synthase family.
  
 
 0.657
CBL45645.1
Nadp-dependent malic enzyme; silverDB:HdN1F2722.
  
 
 0.574
CBL45293.1
Similar to eukaryotic hydroxysteroid (17-beta) dehydrogenase 4; silverDB:HdN1F2256.
  
 
 0.538
fadB
Alpha subunit of fatty acid oxidation complex; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 
 0.497
CBL46623.1
3-hydroxyacyl-CoA dehydrogenase; silverDB:HdN1F4074.
  
 
 0.497
CBL46778.1
Response regulator receiver; silverDB:HdN1F4268.
       0.482
sucC
Succinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
   
 
 0.478
CBL45411.1
Hypothetical protein; silverDB:HdN1F2417.
  
     0.475
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.