STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL46787.1Transcriptional regulator, AraC family; silverDB:HdN1F4282. (332 aa)    
Predicted Functional Partners:
CBL44846.1
AraC-type DNA-binding domain-containing protein; silverDB:HdN1F1661.
  
     0.772
CBL44048.1
Predicted O-Methyltransferase involved in polyketide biosynthesis; silverDB:HdN1F590.
  
     0.605
CBL45319.1
Conserved hypothetical protein; silverDB:HdN1F2293.
  
     0.585
CBL47371.1
Predicted metal-dependent hydrolase; silverDB:HdN1F5047.
  
     0.553
CBL45328.1
Conserved hypothetical protein; silverDB:HdN1F2306.
  
     0.541
CBL46529.1
Hypothetical protein; silverDB:HdN1F3966.
  
     0.540
CBL45344.1
Conserved hypothetical protein; silverDB:HdN1F2327.
  
     0.526
CBL44067.1
Predicted metal-dependent hydrolase; silverDB:HdN1F610.
  
     0.519
CBL45295.1
Predicted metal-dependent hydrolase; silverDB:HdN1F2259.
  
     0.507
CBL46786.1
MaoC-like protein; silverDB:HdN1F4281.
 
     0.499
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.