STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadH2,4-dienoyl-CoA reductase; silverDB:HdN1F4288. (677 aa)    
Predicted Functional Partners:
glsI
Ferredoxin-dependent glutamate synthase; silverDB:HdN1F4117.
  
 
 0.999
etfB
Electron transfer flavoprotein, beta subunit; silverDB:HdN1F4530.
  
 
 0.953
CBL44844.1
Hypothetical protein; silverDB:HdN1F1658.
  
 
 0.918
etfA
Electron transfer flavoprotein, alpha subunit; silverDB:HdN1F4531.
   
 
 0.888
narH
Nitrate reductase, beta subunit; silverDB:HdN1F1753.
    
 
 0.840
ddhB
Dimethylsulfide dehydrogenase beta subunit; silverDB:HdN1F2652.
    
 
 0.840
CBL45732.1
Putative flavodoxin oxidoreductase; silverDB:HdN1F2848.
 
 0.826
CBL44505.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit; silverDB:HdN1F1211.
 
 0.821
rluA
Putative pseudouridine synthase A; silverDB:HdN1F4290.
       0.774
CBL46623.1
3-hydroxyacyl-CoA dehydrogenase; silverDB:HdN1F4074.
 
  
 0.750
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.