STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL46829.1Conserved hypothetical protein; silverDB:HdN1F4337. (661 aa)    
Predicted Functional Partners:
CBL46454.1
Response regulator receiver; silverDB:HdN1F3854.
 
 
 0.990
CBL44589.1
Probably signal protein; silverDB:HdN1F1320.
 
 
 0.986
CBL46820.1
Sensor histidine kinase; silverDB:HdN1F4326.
 
 
 0.984
CBL45463.1
Conserved hypothetical protein; silverDB:HdN1F2482.
 
 
 0.983
CBL46172.1
Hypothetical protein; silverDB:HdN1F3460.
 
 
0.982
CBL43663.1
Predicted histidine kinase; silverDB:HdN1F103.
 
 
 0.980
CBL43830.1
Hypothetical protein; silverDB:HdN1F335.
 
 
0.973
CBL46927.1
Sensory box histidine kinase/response regulator; silverDB:HdN1F4458.
 
 0.971
CBL45271.1
Conserved hypothetical protein; silverDB:HdN1F2226.
 
 
0.962
CBL43765.1
Response regulator, CheY-like; silverDB:HdN1F245.
 
 0.957
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.