STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilZType IV fimbrial biogenesis protein, involved in pilus assembly; silverDB:HdN1F4447. (115 aa)    
Predicted Functional Partners:
CBL45463.1
Conserved hypothetical protein; silverDB:HdN1F2482.
  
 
   0.903
CBL43635.1
GGDEF; silverDB:HdN1F62.
   
   0.854
CBL43664.1
Predicted response regulator receiver; silverDB:HdN1F104.
   
   0.854
CBL43830.1
Hypothetical protein; silverDB:HdN1F335.
    
   0.851
CBL44589.1
Probably signal protein; silverDB:HdN1F1320.
    
   0.851
CBL45271.1
Conserved hypothetical protein; silverDB:HdN1F2226.
    
   0.851
CBL46172.1
Hypothetical protein; silverDB:HdN1F3460.
    
   0.851
CBL46261.1
Conserved hypothetical protein; silverDB:HdN1F3586.
    
   0.851
CBL46773.1
Conserved hypothetical protein; silverDB:HdN1F4260.
    
   0.851
CBL47039.1
Hypothetical protein; silverDB:HdN1F4601.
    
   0.851
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.