STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL46965.1Anti-anti-sigma regulatory factor; silverDB:HdN1F4501. (200 aa)    
Predicted Functional Partners:
CBL46964.1
Response regulator receiver; silverDB:HdN1F4500.
 
 
 0.977
CBL46454.1
Response regulator receiver; silverDB:HdN1F3854.
  
  
 0.861
gacS
Sensor kinase GacS; silverDB:HdN1F1239.
  
  
 0.823
CBL46927.1
Sensory box histidine kinase/response regulator; silverDB:HdN1F4458.
  
  
 0.822
CBL44219.1
Toluene tolerance ABC efflux transporter, ATP-binding protein; silverDB:HdN1F814.
   
   0.798
CBL44221.1
Toluene tolerance ABC transporter, periplasmic substrate-binding protein; silverDB:HdN1F816.
  
   0.797
CBL44220.1
Toluene tolerance ABC efflux transporter, permease; silverDB:HdN1F815.
   
   0.790
flaE
Flagellar basal body FlaE; silverDB:HdN1F1498.
   
    0.775
flgJ
Flagellum-specific muramidase; silverDB:HdN1F1647.
   
    0.775
flgH
Flagellar L-ring protein precursor; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
   
    0.772
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
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