STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL47152.1Short chain dehydrogenase; silverDB:HdN1F4750. (271 aa)    
Predicted Functional Partners:
nuoCD1
NADH dehydrogenase I, chain CD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
   
 
 0.786
nuoCD2
NADH dehydrogenase I, chain CD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
   
 
 0.786
CBL46466.1
Short chain dehydrogenase family protein; silverDB:HdN1F3874; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.785
CBL45569.1
Short-chain dehydrogenase/reductase SDR; silverDB:HdN1F2621; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.783
CBL43836.1
Short-chain dehydrogenase/reductase SDR; silverDB:HdN1F345; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.777
CBL45097.1
Non-ribosomal peptide synthase; silverDB:HdN1F2001.
  
 
 0.768
CBL46394.1
Short-chain dehydrogenase; silverDB:HdN1F3769.
  
     0.764
CBL46981.1
Short-chain dehydrogenase/reductase family protein; silverDB:HdN1F4522; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.759
CBL45096.1
Non-ribosomal peptide synthetase modules and related proteins; silverDB:HdN1F1999.
  
 
 0.751
CBL45343.1
Short-chain dehydrogenase; silverDB:HdN1F2326; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.739
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
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